Difference between revisions of "ERIS"
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Jump to navigationJump to search| Line 14: | Line 14: | ||
*Bioinformatics, Harvard Medical School/Partners Healthcare Cencter for Gentics and Genomics | *Bioinformatics, Harvard Medical School/Partners Healthcare Cencter for Gentics and Genomics | ||
| − | '''Links:''' | + | '''Links https://rc.partners.org:''' |
'''Group size:''' Diverse: | '''Group size:''' Diverse: | ||
*3 bioinformatician developers | *3 bioinformatician developers | ||
*3 Systems Engineers/administrators | *3 Systems Engineers/administrators | ||
| − | * | + | *4 Scientific, Data Analytics & parallel computing Engineers/Specialists/Scientists |
*1 DBA/ DB developer | *1 DBA/ DB developer | ||
*4 Site (MGH, BWH and McLean) senior support specialists | *4 Site (MGH, BWH and McLean) senior support specialists | ||
| Line 25: | Line 25: | ||
'''Environment:''' Diverse: | '''Environment:''' Diverse: | ||
| − | *Linux | + | *Linux, HPC clusters (windows and Linux), Massive Storage, Internal Cloud, Oracle/Postgres/MySQL, Application support, web hosting |
'''Tools:''' | '''Tools:''' | ||
| − | Sequencing, next-gen instruments, proteomics, | + | Sequencing, next-gen instruments, proteomics, image analysis, R, Jupyter, PythonSAS, everything in public domain. |
| − | '''Pertinent hardware info:''' Mainly HP | + | '''Pertinent hardware info:''' Mainly HP, some dell, vanilla boxes, Cisco, IB |
Training: | Training: | ||
Bioinformatics support model: Research-grade SLA's, support pipelines and tools as they can be applied to HPC environment (linux and windows clusters, Large shared-memory machines, web hosted pipelines, etc. | Bioinformatics support model: Research-grade SLA's, support pipelines and tools as they can be applied to HPC environment (linux and windows clusters, Large shared-memory machines, web hosted pipelines, etc. | ||
Latest revision as of 13:46, 24 October 2017
Location: Boston and Cambridge MA, USA
Partners HealtCare Systems
- Consisting of Massachusetts General Hospital
- Brigham and Womens Hospital
- Dana Farber Cancer Institute
- Mclean Hospital
- Spaulding Rehab Hospital
- + 7 regional hospitals
Name/Title: Brent G. Richter, Director:
- Enterprise Research Infrastructure & Systems (ERIS)
- Massachusetts General Hospital & Brigham and Womens Hospital Site Research IT Services
- Bioinformatics, Harvard Medical School/Partners Healthcare Cencter for Gentics and Genomics
Links https://rc.partners.org:
Group size: Diverse:
- 3 bioinformatician developers
- 3 Systems Engineers/administrators
- 4 Scientific, Data Analytics & parallel computing Engineers/Specialists/Scientists
- 1 DBA/ DB developer
- 4 Site (MGH, BWH and McLean) senior support specialists
- 8 Site Infrastructure Technicians
Environment: Diverse:
- Linux, HPC clusters (windows and Linux), Massive Storage, Internal Cloud, Oracle/Postgres/MySQL, Application support, web hosting
Tools: Sequencing, next-gen instruments, proteomics, image analysis, R, Jupyter, PythonSAS, everything in public domain.
Pertinent hardware info: Mainly HP, some dell, vanilla boxes, Cisco, IB
Training:
Bioinformatics support model: Research-grade SLA's, support pipelines and tools as they can be applied to HPC environment (linux and windows clusters, Large shared-memory machines, web hosted pipelines, etc.
