Difference between revisions of "ISMB 2009: Workshop on Post Analysis of NGS Data"
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Revision as of 19:50, 21 July 2009
Organizer: David Sexton, Director, Research Informatics Core, Vanderbilt University, Nashville TN
This in-person session was held during the annual ISMB meeting in Stockholm Sweden as a workshop. Please find presentations below.
Description:
Bioinformatics core facilities have developed infrastructure to manage the flow of next-gen sequencing experiments. Standard analysis of short read sequence includes image analysis, basecalling, and alignment to a reference genome. What value-added service could be offered post-alignment to put the sequence into biological context? For those with experience what questions are your end users asking about the data they are receiving from next-gen sequencing? What software or hardware is necessary to properly analyze this data? Are these analyses similar or are they custom for each project?
Presenters:
- 1) Simon Andrews, Head, Bioinformatics Department, Babraham Institute, Cambridge UK
- 2) Dawei Lin - Director, Bioinformatics Core, UC Davis, Davis CA
- 3) Brent Richter - Director, Enterprise Research IS, Partners Healthcare Systems, Boston MA
Search term in web browser: bioinfo-core Email - [1] Wiki - [2]
Discussion: Panelists consisted of all Presenters. Questions to get started:
- How do you and your staff keep up with new scientific knowledge?
- What are your greatest challenges in the next year?
- What wisdom can you offer with respect hiring staff?
