ISMB 2009: Workshop on Post Analysis of NGS Data

Organizer: David Sexton, Director, Research Informatics Core, Vanderbilt University, Nashville TN

This in-person session was held during the annual ISMB meeting in Stockholm Sweden as a workshop. Please find presentations below.

Description:

Bioinformatics core facilities have developed infrastructure to manage the flow of next-gen sequencing experiments. Standard analysis of short read sequence includes image analysis, basecalling, and alignment to a reference genome. What value-added service could be offered post-alignment to put the sequence into biological context? For those with experience what questions are your end users asking about the data they are receiving from next-gen sequencing? What software or hardware is necessary to properly analyze this data? Are these analyses similar or are they custom for each project?

Presenters:

• 1) Simon Andrews, Head, Bioinformatics Department, Babraham Institute, Cambridge UK
  • Media:Babraham_NGSanalysis_SAndrews.pdf
• 2) Dawei Lin - Director, Bioinformatics Core, UC Davis, Davis CA
  • Media:UCDavis_NGSanalysis_DLin.pdf
• 3) Brent Richter - Director, Enterprise Research IS, Partners Healthcare Systems, Boston MA
  • Media:Partners_NGSanalysis_brichter.pdf

Blogs of the Session

• fiamh.info (Oliver Hofman) [1]
• ISMB/ECCB workshop on Freindfeed [2]

Search term in web browser: bioinfo-core Email - [3] Wiki - [4]