ISMB 2012: Workshop Proposal - Revision history

Bgrichter: Reverted edits by Bgrichter (talk) to last revision by Hrh

2013-07-21T15:29:59Z

Reverted edits by Bgrichter (talk) to last revision by Hrh

Bgrichter at 15:29, 21 July 2013

2013-07-21T15:29:29Z

Hrh at 07:54, 3 September 2012

2012-09-03T07:54:08Z

Bgrichter at 11:35, 18 July 2012

2012-07-18T11:35:52Z

Bgrichter at 11:34, 18 July 2012

2012-07-18T11:34:49Z

Bgrichter: /* Introduction */

2012-07-18T11:31:03Z

Introduction

Bgrichter: /* Introduction */

2012-07-18T11:30:15Z

Introduction

Bgrichter: /* Introduction */

2012-07-18T11:29:49Z

Introduction

Bgrichter at 11:24, 18 July 2012

2012-07-18T11:24:04Z

Bgrichter: /* Speakers */

2012-07-18T11:15:42Z

Speakers

← Older revision		Revision as of 15:29, 21 July 2013
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−	'''The final ISMB Bioinfo Core Workshop agenda can be found at [http://www.iscb.org/~~cms_addon/conferences/ismbeccb2013~~/workshops~~.php~~\|~~#WK03 on twitter~~]'''	+	'''The final ISMB Bioinfo Core Workshop agenda can be found at [http://www.iscb.org/ismb2012-program/ismb2012-workshops#w3\|link]'''

	Click on Show on the Workshop page if the agenda does not display.		Click on Show on the Workshop page if the agenda does not display.

← Older revision		Revision as of 15:29, 21 July 2013
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−	'''The final ISMB Bioinfo Core Workshop agenda can be found at [http://www.iscb.org/~~ismb2012-program~~/~~ismb2012-~~workshops#~~w3\|link~~]'''	+	'''The final ISMB Bioinfo Core Workshop agenda can be found at [http://www.iscb.org/cms_addon/conferences/ismbeccb2013/workshops.php\|#WK03 on twitter]'''

	Click on Show on the Workshop page if the agenda does not display.		Click on Show on the Workshop page if the agenda does not display.

@@ Line 45: / Line 45: @@
 Talk 1:
-====Hans-Rudolph Hotz, Friedrich Miescher Institute for Biomedical Research, Switzerland====
+====Hans-Rudolf Hotz, Friedrich Miescher Institute for Biomedical Research, Switzerland====
 * [[Media:BioinfoCore_WS_HRH_20120716.pdf|Bioinformatics Helpdesk: plasmid maps to HiSeq]]

@@ Line 25: / Line 25: @@
 ''Session Leaders: Jim Cavalcoli + Fran Lewitter''
-Talk 1: ====Stephen Turner, University of Virginia====
+Talk 1:
 * [[Media:StephenTurner_ISMB2012.pdf|From Data to Knowledge: Extracting Biological Insight from Diverse Data Sources]]
-Talk 2: ====James Cavalcoli, University of Michigan====
+Talk 2:
 * [[Media:Workshop_Cavalcoli_v2_short.pdf‎|Challenges of integrating and analyzing different genomic data types]]
@@ Line 42: / Line 44: @@
 * Session Leaders: Brent Richter and David Sexton
-Talk 1: ====Hans-Rudolph Hotz, Friedrich Miescher Institute for Biomedical Research, Switzerland====
+Talk 1:
 * [[Media:BioinfoCore_WS_HRH_20120716.pdf|Bioinformatics Helpdesk: plasmid maps to HiSeq]]
@@ Line 58: / Line 61: @@
            Still, no plasmid mapping tools.  Not perfect nor ideal.
-Talk 2: ====Reinhard Schneider, University of Luxembourg, Luxembourg====
+Talk 2:
 * [[Media:Medical data in Bioinformatics Core facilities.pdf|Challenges with Medical Data]]

@@ Line 23: / Line 23: @@
 === Speakers ===
-* Session Leaders: Jim Cavalcoli + Fran Lewitter
+''Session Leaders: Jim Cavalcoli + Fran Lewitter''
-* Talk 1: [[Media:StephenTurner_ISMB2012.pdf|From Data to Knowledge: Extracting Biological Insight from Diverse Data Sources]] Stephen Turner, University of Virginia
+Talk 1: ====Stephen Turner, University of Virginia====
+* [[Media:StephenTurner_ISMB2012.pdf|From Data to Knowledge: Extracting Biological Insight from Diverse Data Sources]]
-* Talk 2: [[Media:Workshop_Cavalcoli_v2_short.pdf‎|Challenges of integrating and analyzing different genomic data types]] James Cavalcoli, University of Michigan
+Talk 2: ====James Cavalcoli, University of Michigan====
            Discussion: Simon Lin, CAMDA.  Can we leverage CAMDA as a standard dataset for testing tools?
@@ Line 41: / Line 42: @@
 * Session Leaders: Brent Richter and David Sexton
-* Talk 1: [[Media:BioinfoCore_WS_HRH_20120716.pdf|Bioinformatics Helpdesk: plasmid maps to HiSeq]], Hans-Rudolph Hotz, Friedrich Miescher Institute for Biomedical Research, Switzerland
+Talk 1: ====Hans-Rudolph Hotz, Friedrich Miescher Institute for Biomedical Research, Switzerland====
@@ Line 56: / Line 58: @@
            Still, no plasmid mapping tools.  Not perfect nor ideal.
-* Talk 2: [[Media:Medical data in Bioinformatics Core facilities.pdf|Challenges with Medical Data]], Reinhard Schneider, University of Luxembourg, Luxembourg
+Talk 2: ====Reinhard Schneider, University of Luxembourg, Luxembourg====
            Dealing with different regulations in different countries.
 == Speaker Notes ==

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 The 2012 ISMB meeting was held 15-17 July in Long Beach, California.  The bioinfo-core workshop was 2 hours, split into two one hour topics. Within each topic we had 2 short talks (~10 mins each) by members of the group to introduce the topic, followed by an interactive panel discussion with all workshop participants where the topic was further explored.  Below you will find the materials from the conference.
-You can also read through the workshops tweets by searching on [https://twitter.com/#!/search/%23WK3| #WK3]] at twitter.com. You will get more specific hits through searching on [https://twitter.com/#!/search/%23WK3%20%23ISMB| #WK3 #ISMB].
+You can also read through the workshops tweets by searching on [https://twitter.com/#!/search/%23WK3| #WK3] at twitter.com. You will get more specific hits through searching on [https://twitter.com/#!/search/%23WK3%20%23ISMB| #WK3 #ISMB].
 As in previous years we have aimed to have one topic mostly focused on science and analysis, and another which focuses on the technical aspects of running a core facility.

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 == Introduction ==
-The 2012 ISMB meeting will be held 15-17 July in Long Beach, California.  The Bioinfo-core group is again proposing  a workshop within the main body of the conference. This workshop will be 2 hours, split into two one hour topics. Within each topic there will be short talks (~10 mins each) by members of the group to introduce the topic, followed by an interactive panel discussion with all workshop participants where the topic can be further explored.
+The 2012 ISMB meeting was held 15-17 July in Long Beach, California.  The bioinfo-core workshop was 2 hours, split into two one hour topics. Within each topic we had 2 short talks (~10 mins each) by members of the group to introduce the topic, followed by an interactive panel discussion with all workshop participants where the topic was further explored.  Below you will find the materials from the conference.
-This page will initially help use to put together a proposal for ISMB, and assuming our proposal is accepted will become the official program for the workshop.
+You can also read through the workshops tweets by searching on [https://twitter.com/#!/search/WK3|#WK3]] at twitter.com.
 As in previous years we have aimed to have one topic mostly focused on science and analysis, and another which focuses on the technical aspects of running a core facility.