http://bioinfo-core.org/index.php?action=history&feed=atom&title=Sequence_Contaminant_List 2026-04-05T14:32:57Z Revision history for this page on the wiki MediaWiki 1.34.0 http://bioinfo-core.org/index.php?title=Sequence_Contaminant_List&diff=8290&oldid=prev 2010-11-19T14:03:48Z

<p>New page: This is a list of contaminants found in high throughput sequencing applications. This could be used to remove or identify potential contaminants. &lt;code&gt;Illumina Single End Apapter 1 ...</p> <p><b>New page</b></p><div>This is a list of contaminants found in high throughput sequencing applications. This could be used to remove or identify potential contaminants.<br /> <br /> &lt;code&gt;Illumina Single End Apapter 1 ACACTCTTTCCCTACACGACGCTGTTCCATCT<br /> Illumina Single End Apapter 2 CAAGCAGAAGACGGCATACGAGCTCTTCCGATCT<br /> Illumina Single End PCR Primer 1 AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT<br /> Illumina Single End PCR Primer 2 CAAGCAGAAGACGGCATACGAGCTCTTCCGATCT<br /> Illumina Single End Sequencing Primer ACACTCTTTCCCTACACGACGCTCTTCCGATCT<br /> <br /> Illumina Paired End Adapter 1 ACACTCTTTCCCTACACGACGCTCTTCCGATCT<br /> Illumina Paired End Adapter 2 CTCGGCATTCCTGCTGAACCGCTCTTCCGATCT<br /> Illumina Paried End PCR Primer 1 AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT<br /> Illumina Paired End PCR Primer 2 CAAGCAGAAGACGGCATACGAGATCGGTCTCGGCATTCCTGCTGAACCGCTCTTCCGATCT<br /> Illumina Paried End Sequencing Primer 1 ACACTCTTTCCCTACACGACGCTCTTCCGATCT<br /> Illumina Paired End Sequencing Primer 2 CGGTCTCGGCATTCCTACTGAACCGCTCTTCCGATCT<br /> <br /> Illumina DpnII expression Adapter 1 ACAGGTTCAGAGTTCTACAGTCCGAC<br /> Illumina DpnII expression Adapter 2 CAAGCAGAAGACGGCATACGA<br /> Illumina DpnII expression PCR Primer 1 CAAGCAGAAGACGGCATACGA<br /> Illumina DpnII expression PCR Primer 2 AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA<br /> Illumina DpnII expression Sequencing Primer CGACAGGTTCAGAGTTCTACAGTCCGACGATC<br /> <br /> Illumina NlaIII expression Adapter 1 ACAGGTTCAGAGTTCTACAGTCCGACATG<br /> Illumina NlaIII expression Adapter 2 CAAGCAGAAGACGGCATACGA<br /> Illumina NlaIII expression PCR Primer 1 CAAGCAGAAGACGGCATACGA<br /> Illumina NlaIII expression PCR Primer 2 AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA<br /> Illumina NlaIII expression Sequencing Primer CCGACAGGTTCAGAGTTCTACAGTCCGACATG<br /> <br /> Illumina Small RNA Adapter 1 GTTCAGAGTTCTACAGTCCGACGATC<br /> Illumina Small RNA Adapter 2 TCGTATGCCGTCTTCTGCTTGT<br /> Illumina Small RNA RT Primer CAAGCAGAAGACGGCATACGA<br /> Illumina Small RNA PCR Primer 1 CAAGCAGAAGACGGCATACGA<br /> Illumina Small RNA PCR Primer 2 AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA<br /> Illumina Small RNA Sequencing Primer CGACAGGTTCAGAGTTCTACAGTCCGACGATC<br /> <br /> Illumina Multiplexing Adapter 1 GATCGGAAGAGCACACGTCT<br /> Illumina Multiplexing Adapter 2 ACACTCTTTCCCTACACGACGCTCTTCCGATCT<br /> Illumina Multiplexing PCR Primer 1.01 AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT<br /> Illumina Multiplexing PCR Primer 2.01 GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT<br /> Illumina Multiplexing Read1 Sequencing Primer ACACTCTTTCCCTACACGACGCTCTTCCGATCT<br /> Illumina Multiplexing Index Sequencing Primer GATCGGAAGAGCACACGTCTGAACTCCAGTCAC<br /> Illumina Multiplexing Read2 Sequencing Primer GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT<br /> <br /> Illumina PCR Primer Index 1 CAAGCAGAAGACGGCATACGAGATCGTGATGTGACTGGAGTTC<br /> Illumina PCR Primer Index 2 CAAGCAGAAGACGGCATACGAGATACATCGGTGACTGGAGTTC<br /> Illumina PCR Primer Index 3 CAAGCAGAAGACGGCATACGAGATGCCTAAGTGACTGGAGTTC<br /> Illumina PCR Primer Index 4 CAAGCAGAAGACGGCATACGAGATTGGTCAGTGACTGGAGTTC<br /> Illumina PCR Primer Index 5 CAAGCAGAAGACGGCATACGAGATCACTGTGTGACTGGAGTTC<br /> Illumina PCR Primer Index 6 CAAGCAGAAGACGGCATACGAGATATTGGCGTGACTGGAGTTC<br /> Illumina PCR Primer Index 7 CAAGCAGAAGACGGCATACGAGATGATCTGGTGACTGGAGTTC<br /> Illumina PCR Primer Index 8 CAAGCAGAAGACGGCATACGAGATTCAAGTGTGACTGGAGTTC<br /> Illumina PCR Primer Index 9 CAAGCAGAAGACGGCATACGAGATCTGATCGTGACTGGAGTTC<br /> Illumina PCR Primer Index 10 CAAGCAGAAGACGGCATACGAGATAAGCTAGTGACTGGAGTTC<br /> Illumina PCR Primer Index 11 CAAGCAGAAGACGGCATACGAGATGTAGCCGTGACTGGAGTTC<br /> Illumina PCR Primer Index 12 CAAGCAGAAGACGGCATACGAGATTACAAGGTGACTGGAGTTC<br /> <br /> Illumina DpnII Gex Adapter 1 GATCGTCGGACTGTAGAACTCTGAAC<br /> Illumina DpnII Gex Adapter 1.01 ACAGGTTCAGAGTTCTACAGTCCGAC<br /> Illumina DpnII Gex Adapter 2 CAAGCAGAAGACGGCATACGA<br /> Illumina DpnII Gex Adapter 2.01 TCGTATGCCGTCTTCTGCTTG<br /> Illumina DpnII Gex PCR Primer 1 CAAGCAGAAGACGGCATACGA<br /> Illumina DpnII Gex PCR Primer 2 AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA<br /> Illumina DpnII Gex Sequencing Primer CGACAGGTTCAGAGTTCTACAGTCCGACGATC<br /> <br /> Illumina NlaIII Gex Adapter 1.01 TCGGACTGTAGAACTCTGAAC<br /> Illumina NlaIII Gex Adapter 1.02 ACAGGTTCAGAGTTCTACAGTCCGACATG<br /> Illumina NlaIII Gex Adapter 2.01 CAAGCAGAAGACGGCATACGA<br /> Illumina NlaIII Gex Adapter 2.02 TCGTATGCCGTCTTCTGCTTG<br /> Illumina NlaIII Gex PCR Primer 1 CAAGCAGAAGACGGCATACGA<br /> Illumina NlaIII Gex PCR Primer 2 AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA<br /> Illumina NlaIII Gex Sequencing Primer CCGACAGGTTCAGAGTTCTACAGTCCGACATG<br /> <br /> Illumina Small RNA RT Primer CAAGCAGAAGACGGCATACGA<br /> Illumina 5p RNA Adapter GTTCAGAGTTCTACAGTCCGACGATC<br /> Illumina RNA Adapter1 TCGTATGCCGTCTTCTGCTTGT<br /> <br /> Illumina Small RNA 3p Adapter 1 ATCTCGTATGCCGTCTTCTGCTTG<br /> Illumina Small RNA PCR Primer 1 CAAGCAGAAGACGGCATACGA<br /> Illumina Small RNA PCR Primer 2 AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA<br /> Illumina Small RNA Sequencing Primer CGACAGGTTCAGAGTTCTACAGTCCGACGATC<br /> <br /> ABI Dynabead EcoP Oligo CTGATCTAGAGGTACCGGATCCCAGCAGT<br /> ABI Solid3 Adapter A CTGCCCCGGGTTCCTCATTCTCTCAGCAGCATG<br /> ABI Solid3 Adapter B CCACTACGCCTCCGCTTTCCTCTCTATGGGCAGTCGGTGAT<br /> ABI Solid3 5&#039; AMP Primer CCACTACGCCTCCGCTTTCCTCTCTATG<br /> ABI Solid3 3&#039; AMP Primer CTGCCCCGGGTTCCTCATTCT<br /> ABI Solid3 EF1 alpha Sense Primer CATGTGTGTTGAGAGCTTC<br /> ABI Solid3 EF1 alpha Antisense Primer GAAAACCAAAGTGGTCCAC<br /> ABI Solid3 GAPDH Forward Primer TTAGCACCCCTGGCCAAGG<br /> ABI Solid3 GAPDH Reverse Primer CTTACTCCTTGGAGGCCATG<br /> &lt;/code&gt;</div>

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